MANIFEST.in
README.md
setup.py
evcouplings/__init__.py
evcouplings.egg-info/PKG-INFO
evcouplings.egg-info/SOURCES.txt
evcouplings.egg-info/dependency_links.txt
evcouplings.egg-info/entry_points.txt
evcouplings.egg-info/requires.txt
evcouplings.egg-info/top_level.txt
evcouplings/align/__init__.py
evcouplings/align/alignment.py
evcouplings/align/ena.py
evcouplings/align/ids.py
evcouplings/align/pfam.py
evcouplings/align/protocol.py
evcouplings/align/tools.py
evcouplings/compare/__init__.py
evcouplings/compare/distances.py
evcouplings/compare/ecs.py
evcouplings/compare/mapping.py
evcouplings/compare/pdb.py
evcouplings/compare/protocol.py
evcouplings/compare/sifts.py
evcouplings/complex/__init__.py
evcouplings/complex/alignment.py
evcouplings/complex/distance.py
evcouplings/complex/protocol.py
evcouplings/complex/similarity.py
evcouplings/couplings/__init__.py
evcouplings/couplings/mapping.py
evcouplings/couplings/mean_field.py
evcouplings/couplings/model.py
evcouplings/couplings/pairs.py
evcouplings/couplings/protocol.py
evcouplings/couplings/tools.py
evcouplings/couplings/scoring_models/logistic_regression_all.yml
evcouplings/fold/__init__.py
evcouplings/fold/cns.py
evcouplings/fold/filter.py
evcouplings/fold/haddock.py
evcouplings/fold/protocol.py
evcouplings/fold/ranking.py
evcouplings/fold/restraints.py
evcouplings/fold/tools.py
evcouplings/fold/cns_templates/dg_sa.inp
evcouplings/fold/cns_templates/generate_easy.inp
evcouplings/fold/cns_templates/generate_extended.inp
evcouplings/fold/cns_templates/generate_seq.inp
evcouplings/fold/cns_templates/haddock_restraints.yml
evcouplings/fold/cns_templates/model_minimize.inp
evcouplings/fold/cns_templates/restraints.yml
evcouplings/mutate/__init__.py
evcouplings/mutate/calculations.py
evcouplings/mutate/protocol.py
evcouplings/utils/__init__.py
evcouplings/utils/app.py
evcouplings/utils/batch.py
evcouplings/utils/calculations.py
evcouplings/utils/config.py
evcouplings/utils/constants.py
evcouplings/utils/helpers.py
evcouplings/utils/pipeline.py
evcouplings/utils/summarize.py
evcouplings/utils/system.py
evcouplings/utils/update_database.py
evcouplings/utils/tracker/__init__.py
evcouplings/utils/tracker/base.py
evcouplings/utils/tracker/mongodb.py
evcouplings/utils/tracker/sql.py
evcouplings/visualize/__init__.py
evcouplings/visualize/misc.py
evcouplings/visualize/mutations.py
evcouplings/visualize/pairs.py
evcouplings/visualize/parameters.py
evcouplings/visualize/pymol.py
test/TestComplex.py
test/TestFold.py
test/TestMutation.py
test/TestUtilsApp.py
test/TestUtilsBatch.py
test/TestUtilsCalculate.py
test/TestUtilsConfig.py
test/TestUtilsHelpers.py
test/TestUtilsSystem.py
test/TestUtilsUpdateDatabase.py
test/__init__.py