.git_archival.txt
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README.md
_config.yml
environment.yml
index.md
setup.py
pyapetnet/__init__.py
pyapetnet/generators.py
pyapetnet/list_models.py
pyapetnet/losses.py
pyapetnet/models.py
pyapetnet/predict_from_dicom.py
pyapetnet/predict_from_nifti.py
pyapetnet/preprocessing.py
pyapetnet/registration.py
pyapetnet/utils.py
pyapetnet.egg-info/PKG-INFO
pyapetnet.egg-info/SOURCES.txt
pyapetnet.egg-info/dependency_links.txt
pyapetnet.egg-info/entry_points.txt
pyapetnet.egg-info/requires.txt
pyapetnet.egg-info/top_level.txt
pyapetnet/demos/.gitignore
pyapetnet/demos/002_setup_brainweb.py
pyapetnet/demos/003_data_generator.py
pyapetnet/demos/004_train_model.py
pyapetnet/demos/005_bowcnn_queue.py
pyapetnet/trained_models/model_description.md
pyapetnet/trained_models/190528_paper_bet_10_psf_mlem/config.json
pyapetnet/trained_models/190528_paper_bet_10_psf_mlem/saved_model.pb
pyapetnet/trained_models/190528_paper_bet_10_psf_mlem/variables/variables.data-00000-of-00001
pyapetnet/trained_models/190528_paper_bet_10_psf_mlem/variables/variables.index
pyapetnet/trained_models/200824_mae_osem_nopsf_bet_10/config.json
pyapetnet/trained_models/200824_mae_osem_nopsf_bet_10/saved_model.pb
pyapetnet/trained_models/200824_mae_osem_nopsf_bet_10/variables/variables.data-00000-of-00001
pyapetnet/trained_models/200824_mae_osem_nopsf_bet_10/variables/variables.index
pyapetnet/trained_models/200824_mae_osem_psf_bet_10/config.json
pyapetnet/trained_models/200824_mae_osem_psf_bet_10/saved_model.pb
pyapetnet/trained_models/200824_mae_osem_psf_bet_10/variables/variables.data-00000-of-00001
pyapetnet/trained_models/200824_mae_osem_psf_bet_10/variables/variables.index
pyapetnet/trained_models/S1_osem_b10_fdg/config.json
pyapetnet/trained_models/S1_osem_b10_fdg/log.csv
pyapetnet/trained_models/S1_osem_b10_fdg/models.py
pyapetnet/trained_models/S1_osem_b10_fdg/saved_model.pb
pyapetnet/trained_models/S1_osem_b10_fdg/variables/variables.data-00000-of-00001
pyapetnet/trained_models/S1_osem_b10_fdg/variables/variables.index
pyapetnet/trained_models/S2_osem_b10_fdg_pe2i/config.json
pyapetnet/trained_models/S2_osem_b10_fdg_pe2i/log.csv
pyapetnet/trained_models/S2_osem_b10_fdg_pe2i/models.py
pyapetnet/trained_models/S2_osem_b10_fdg_pe2i/saved_model.pb
pyapetnet/trained_models/S2_osem_b10_fdg_pe2i/variables/variables.data-00000-of-00001
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pyapetnet/trained_models/S3_osem_b10_fdg_pe2i/config.json
pyapetnet/trained_models/S3_osem_b10_fdg_pe2i/log.csv
pyapetnet/trained_models/S3_osem_b10_fdg_pe2i/models.py
pyapetnet/trained_models/S3_osem_b10_fdg_pe2i/saved_model.pb
pyapetnet/trained_models/S3_osem_b10_fdg_pe2i/variables/variables.data-00000-of-00001
pyapetnet/trained_models/S3_osem_b10_fdg_pe2i/variables/variables.index
scripts/.gitignore
scripts/brainweb.py
scripts/simulate_2d_data.pro
scripts/simulate_mmr_data.pro
scripts/train_bow_cnn_tf2.py
scripts/train_cfg.json
scripts/validate_bow_cnn.py
scripts/paper/.gitignore
scripts/paper/FreeSurferColorLUT.txt
scripts/paper/analyze_prediction.py
scripts/paper/batch_predict.py
scripts/paper/compare_metrics_scale.py
scripts/paper/compare_metrics_shift.py
scripts/paper/compare_metrics_sm.py
scripts/paper/input_res_test.py
scripts/paper/predict_phantom.py