[console_scripts]
fastq_count = sequana.scripts.fastq_count:main
fastq_head = sequana.scripts.fastq_head:main
sequana = sequana.scripts.main:main
sequana_compressor = sequana.scripts.compressor:main
sequana_coverage = sequana.scripts.coverage:main
sequana_fastq_count = sequana.scripts.fastq_count:main
sequana_fastq_head = sequana.scripts.fastq_head:main
sequana_gui = sequana.gui.sequana_gui:main
sequana_mapping = sequana.scripts.mapping:main
sequana_report = sequana.scripts.reports:main
sequana_summary = sequana.scripts.summary:main
sequana_taxonomy = sequana.scripts.taxonomy:main
sequana_vcf_filter = sequana.scripts.vcf_filter:main
sequanix = sequana.gui.sequana_gui:main

[multiqc.hooks.v1]
before_config = sequana.multiqc:multiqc_sequana_config

[multiqc.modules.v1]
sequana_pacbio_qc = sequana.multiqc.pacbio_qc:MultiqcModule
sequana_quality_control = sequana.multiqc.quality_control:MultiqcModule

[sequana.module]
sequana_coverage = sequana.modules_report.coverage:CoverageModule
sequana_summary = sequana.modules_report.summary:SummaryModule
sequana_variant_calling = sequana.modules_report.variant_calling:VariantCallingModule

