echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -g FARNA_hires-_peyote.csv -m 10 -o FARNA_hires_1 3f1hB/struc/3f1hB_M212.pdb 3f1hB/struc/3f1hB_M105.pdb 3f1hB/struc/3f1hB_M487.pdb 3f1hB/struc/3f1hB_M477.pdb 3f1hB/struc/3f1hB_M312.pdb 3f1hB/struc/3f1hB_M195.pdb 3f1hB/struc/3f1hB_M134.pdb 3f1hB/struc/3f1hB_M442.pdb 3f1hB/struc/3f1hB_M80.pdb 3f1hB/struc/3f1hB_M19.pdb 3f1hB/struc/3f1hB_M265.pdb 3f1hB/struc/3f1hB_M17.pdb 3f1hB/struc/3f1hB_M396.pdb 3f1hB/struc/3f1hB_M472.pdb 3f1hB/struc/3f1hB_M388.pdb 3f1hB/struc/3f1hB_M293.pdb 3f1hB/struc/3f1hB_M319.pdb 3f1hB/struc/3f1hB_M455.pdb 3f1hB/struc/3f1hB_M170.pdb 3f1hB/struc/3f1hB_M369.pdb 3f1hB/struc/3f1hB_M136.pdb 3f1hB/struc/3f1hB_M414.pdb 3f1hB/struc/3f1hB_M436.pdb 3f1hB/struc/3f1hB_M419.pdb 3f1hB/struc/3f1hB_M109.pdb 3f1hB/struc/3f1hB_M253.pdb 3f1hB/struc/3f1hB_M235.pdb 3f1hB/struc/3f1hB_M454.pdb 3f1hB/struc/3f1hB_M22.pdb 3f1hB/struc/3f1hB_M322.pdb 3f1hB/struc/3f1hB_M199.pdb 3f1hB/struc/3f1hB_M397.pdb 3f1hB/struc/3f1hB_M161.pdb 3f1hB/struc/3f1hB_M182.pdb 3f1hB/struc/3f1hB_M76.pdb 3f1hB/struc/3f1hB_M61.pdb 3f1hB/struc/3f1hB_M333.pdb 3f1hB/struc/3f1hB_M351.pdb 3f1hB/struc/3f1hB_M79.pdb 3f1hB/struc/3f1hB_M122.pdb 3f1hB/struc/3f1hB_M306.pdb 3f1hB/struc/3f1hB_M197.pdb 3f1hB/struc/3f1hB_M62.pdb 3f1hB/struc/3f1hB_M407.pdb 3f1hB/struc/3f1hB_M302.pdb 3f1hB/struc/3f1hB_M482.pdb 3f1hB/struc/3f1hB_M30.pdb 3f1hB/struc/3f1hB_M382.pdb 3f1hB/struc/3f1hB_M164.pdb 3f1hB/struc/3f1hB_M255.pdb 3f1hB/struc/3f1hB_M233.pdb 3f1hB/struc/3f1hB_M203.pdb 3f1hB/struc/3f1hB_M451.pdb 3f1hB/struc/3f1hB_M297.pdb 3f1hB/struc/3f1hB_M194.pdb 3f1hB/struc/3f1hB_M131.pdb 3f1hB/struc/3f1hB_M50.pdb 3f1hB/struc/3f1hB_M339.pdb 3f1hB/struc/3f1hB_M334.pdb 3f1hB/struc/3f1hB_M483.pdb 3f1hB/struc/3f1hB_M124.pdb 3f1hB/struc/3f1hB_M73.pdb 3f1hB/struc/3f1hB_M153.pdb 3f1hB/struc/3f1hB_M179.pdb 3f1hB/struc/3f1hB_M162.pdb 3f1hB/struc/3f1hB_M23.pdb 3f1hB/struc/3f1hB_M205.pdb 3f1hB/struc/3f1hB_M303.pdb 3f1hB/struc/3f1hB_M492.pdb 3f1hB/struc/3f1hB_M434.pdb 3f1hB/struc/3f1hB_M305.pdb 3f1hB/struc/3f1hB_M268.pdb 3f1hB/struc/3f1hB_M1.pdb 3f1hB/struc/3f1hB_M346.pdb 3f1hB/struc/3f1hB_M309.pdb 3f1hB/struc/3f1hB_M6.pdb 3f1hB/struc/3f1hB_M457.pdb 3f1hB/struc/3f1hB_M428.pdb 3f1hB/struc/3f1hB_M342.pdb 3f1hB/struc/3f1hB_M177.pdb 3f1hB/struc/3f1hB_M374.pdb 3f1hB/struc/3f1hB_M66.pdb 3f1hB/struc/3f1hB_M286.pdb 3f1hB/struc/3f1hB_M298.pdb 3f1hB/struc/3f1hB_M362.pdb 3f1hB/struc/3f1hB_M18.pdb 3f1hB/struc/3f1hB_M467.pdb 3f1hB/struc/3f1hB_M223.pdb 3f1hB/struc/3f1hB_M159.pdb 3f1hB/struc/3f1hB_M484.pdb 3f1hB/struc/3f1hB_M100.pdb 3f1hB/struc/3f1hB_M187.pdb 3f1hB/struc/3f1hB_M8.pdb 3f1hB/struc/3f1hB_M366.pdb 3f1hB/struc/3f1hB_M13.pdb 3f1hB/struc/3f1hB_M272.pdb 3f1hB/struc/3f1hB_M416.pdb 3f1hB/struc/3f1hB_M15.pdb 3f1hB/struc/3f1hB_M494.pdb 3f1hB/struc/3f1hB_M283.pdb 3f1hB/struc/3f1hB_M229.pdb 3f1hB/struc/3f1hB_M52.pdb 3f1hB/struc/3f1hB_M371.pdb 3f1hB/struc/3f1hB_M375.pdb 3f1hB/struc/3f1hB_M33.pdb 3f1hB/struc/3f1hB_M230.pdb 3f1hB/struc/3f1hB_M486.pdb 3f1hB/struc/3f1hB_M386.pdb 3f1hB/struc/3f1hB_M399.pdb 3f1hB/struc/3f1hB_M327.pdb 3f1hB/struc/3f1hB_M379.pdb 3f1hB/struc/3f1hB_M248.pdb 3f1hB/struc/3f1hB_M271.pdb 3f1hB/struc/3f1hB_M411.pdb 3f1hB/struc/3f1hB_M311.pdb 3f1hB/struc/3f1hB_M459.pdb 3f1hB/struc/3f1hB_M201.pdb 3f1hB/struc/3f1hB_M184.pdb 3f1hB/struc/3f1hB_M466.pdb 3f1hB/struc/3f1hB_M37.pdb 3f1hB/struc/3f1hB_M488.pdb 3f1hB/struc/3f1hB_M393.pdb 3f1hB/struc/3f1hB_M156.pdb 3f1hB/struc/3f1hB_M481.pdb 3f1hB/struc/3f1hB_M471.pdb 3f1hB/struc/3f1hB_M38.pdb 3f1hB/struc/3f1hB_M433.pdb 3f1hB/struc/3f1hB_M108.pdb 3f1hB/struc/3f1hB_M158.pdb 3f1hB/struc/3f1hB_M115.pdb 3f1hB/struc/3f1hB_M89.pdb 3f1hB/struc/3f1hB_M202.pdb 3f1hB/struc/3f1hB_M325.pdb 3f1hB/struc/3f1hB_M473.pdb 3f1hB/struc/3f1hB_M3.pdb 3f1hB/struc/3f1hB_M4.pdb 3f1hB/struc/3f1hB_M345.pdb 3f1hB/struc/3f1hB_M315.pdb 3f1hB/struc/3f1hB_M320.pdb 3f1hB/struc/3f1hB_M493.pdb 3f1hB/struc/3f1hB_M406.pdb 3f1hB/struc/3f1hB_M468.pdb 3f1hB/struc/3f1hB_M464.pdb 3f1hB/struc/3f1hB_M59.pdb 3f1hB/struc/3f1hB_M326.pdb 3f1hB/struc/3f1hB_M395.pdb 3f1hB/struc/3f1hB_M181.pdb 3f1hB/struc/3f1hB_M373.pdb 3f1hB/struc/3f1hB_M51.pdb 3f1hB/struc/3f1hB_M276.pdb 3f1hB/struc/3f1hB_M264.pdb 3f1hB/struc/3f1hB_M98.pdb 3f1hB/struc/3f1hB_M426.pdb 3f1hB/struc/3f1hB_M401.pdb 3f1hB/struc/3f1hB_M387.pdb 3f1hB/struc/3f1hB_M499.pdb 3f1hB/struc/3f1hB_M77.pdb 3f1hB/struc/3f1hB_M295.pdb 3f1hB/struc/3f1hB_M336.pdb 3f1hB/struc/3f1hB_M186.pdb 3f1hB/struc/3f1hB_M391.pdb 3f1hB/struc/3f1hB_M91.pdb 3f1hB/struc/3f1hB_M119.pdb 3f1hB/struc/3f1hB_M67.pdb 3f1hB/struc/3f1hB_M400.pdb 3f1hB/struc/3f1hB_M95.pdb 3f1hB/struc/3f1hB_M254.pdb 3f1hB/struc/3f1hB_M149.pdb 3f1hB/struc/3f1hB_M275.pdb 3f1hB/struc/3f1hB_M118.pdb 3f1hB/struc/3f1hB_M225.pdb 3f1hB/struc/3f1hB_M56.pdb 3f1hB/struc/3f1hB_M139.pdb 3f1hB/struc/3f1hB_M144.pdb 3f1hB/struc/3f1hB_M26.pdb 3f1hB/struc/3f1hB_M192.pdb 3f1hB/struc/3f1hB_M178.pdb 3f1hB/struc/3f1hB_M27.pdb 3f1hB/struc/3f1hB_M106.pdb 3f1hB/struc/3f1hB_M344.pdb 3f1hB/struc/3f1hB_M413.pdb 1un6F/struc/1un6F_M141.pdb 1un6F/struc/1un6F_M377.pdb 1un6F/struc/1un6F_M490.pdb 1un6F/struc/1un6F_M437.pdb 1un6F/struc/1un6F_M73.pdb 1un6F/struc/1un6F_M487.pdb 1un6F/struc/1un6F_M467.pdb 1un6F/struc/1un6F_M233.pdb 1un6F/struc/1un6F_M412.pdb 1un6F/struc/1un6F_M448.pdb 1un6F/struc/1un6F_M47.pdb 1un6F/struc/1un6F_M142.pdb 1un6F/struc/1un6F_M218.pdb 1un6F/struc/1un6F_M455.pdb 1un6F/struc/1un6F_M313.pdb 1un6F/struc/1un6F_M333.pdb 1un6F/struc/1un6F_M95.pdb 1un6F/struc/1un6F_M470.pdb 1un6F/struc/1un6F_M301.pdb 1un6F/struc/1un6F_M401.pdb 1un6F/struc/1un6F_M140.pdb 1un6F/struc/1un6F_M26.pdb 1un6F/struc/1un6F_M90.pdb 1un6F/struc/1un6F_M319.pdb 1un6F/struc/1un6F_M463.pdb 1un6F/struc/1un6F_M44.pdb 1un6F/struc/1un6F_M79.pdb 1un6F/struc/1un6F_M443.pdb 1un6F/struc/1un6F_M78.pdb 1un6F/struc/1un6F_M346.pdb 1un6F/struc/1un6F_M352.pdb 1un6F/struc/1un6F_M307.pdb 1un6F/struc/1un6F_M403.pdb 1un6F/struc/1un6F_M93.pdb 1un6F/struc/1un6F_M179.pdb 1un6F/struc/1un6F_M239.pdb 1un6F/struc/1un6F_M471.pdb 1un6F/struc/1un6F_M135.pdb 1un6F/struc/1un6F_M30.pdb 1un6F/struc/1un6F_M37.pdb 1un6F/struc/1un6F_M394.pdb 1un6F/struc/1un6F_M322.pdb 1un6F/struc/1un6F_M129.pdb 1un6F/struc/1un6F_M111.pdb 1un6F/struc/1un6F_M229.pdb 1un6F/struc/1un6F_M8.pdb 1un6F/struc/1un6F_M375.pdb 1un6F/struc/1un6F_M199.pdb 1un6F/struc/1un6F_M391.pdb 1un6F/struc/1un6F_M349.pdb 1un6F/struc/1un6F_M450.pdb 1un6F/struc/1un6F_M359.pdb 1un6F/struc/1un6F_M45.pdb 1un6F/struc/1un6F_M154.pdb 1un6F/struc/1un6F_M202.pdb 1un6F/struc/1un6F_M28.pdb 1un6F/struc/1un6F_M74.pdb 1un6F/struc/1un6F_M267.pdb 1un6F/struc/1un6F_M300.pdb 1un6F/struc/1un6F_M444.pdb 1un6F/struc/1un6F_M137.pdb 1un6F/struc/1un6F_M162.pdb 1un6F/struc/1un6F_M170.pdb 1un6F/struc/1un6F_M105.pdb 1un6F/struc/1un6F_M120.pdb 1un6F/struc/1un6F_M287.pdb 1un6F/struc/1un6F_M153.pdb 1un6F/struc/1un6F_M272.pdb 1un6F/struc/1un6F_M48.pdb 1un6F/struc/1un6F_M371.pdb 1un6F/struc/1un6F_M406.pdb 1un6F/struc/1un6F_M458.pdb 1un6F/struc/1un6F_M459.pdb 1un6F/struc/1un6F_M393.pdb 1un6F/struc/1un6F_M62.pdb 1un6F/struc/1un6F_M126.pdb 1un6F/struc/1un6F_M231.pdb 1un6F/struc/1un6F_M197.pdb 1un6F/struc/1un6F_M400.pdb 1un6F/struc/1un6F_M338.pdb 1un6F/struc/1un6F_M203.pdb 1un6F/struc/1un6F_M414.pdb 1un6F/struc/1un6F_M71.pdb 1un6F/struc/1un6F_M341.pdb 1un6F/struc/1un6F_M285.pdb 1un6F/struc/1un6F_M286.pdb 1un6F/struc/1un6F_M491.pdb 1un6F/struc/1un6F_M402.pdb 1un6F/struc/1un6F_M192.pdb 1un6F/struc/1un6F_M227.pdb 1un6F/struc/1un6F_M244.pdb 1un6F/struc/1un6F_M147.pdb 1un6F/struc/1un6F_M72.pdb 1un6F/struc/1un6F_M207.pdb 1un6F/struc/1un6F_M127.pdb 1un6F/struc/1un6F_M63.pdb 1un6F/struc/1un6F_M383.pdb 1un6F/struc/1un6F_M100.pdb 1un6F/struc/1un6F_M330.pdb 1un6F/struc/1un6F_M339.pdb 1un6F/struc/1un6F_M19.pdb 1un6F/struc/1un6F_M385.pdb 1un6F/struc/1un6F_M99.pdb 1un6F/struc/1un6F_M159.pdb 1un6F/struc/1un6F_M424.pdb 1un6F/struc/1un6F_M6.pdb 1un6F/struc/1un6F_M94.pdb 1un6F/struc/1un6F_M163.pdb 1un6F/struc/1un6F_M173.pdb 1un6F/struc/1un6F_M49.pdb 1un6F/struc/1un6F_M492.pdb 1un6F/struc/1un6F_M221.pdb 1un6F/struc/1un6F_M232.pdb 1un6F/struc/1un6F_M465.pdb 1un6F/struc/1un6F_M273.pdb 1un6F/struc/1un6F_M3.pdb 1un6F/struc/1un6F_M228.pdb 1un6F/struc/1un6F_M145.pdb 1un6F/struc/1un6F_M146.pdb 1un6F/struc/1un6F_M399.pdb 1un6F/struc/1un6F_M308.pdb 1un6F/struc/1un6F_M190.pdb 1un6F/struc/1un6F_M279.pdb 1un6F/struc/1un6F_M161.pdb 1un6F/struc/1un6F_M386.pdb 1un6F/struc/1un6F_M98.pdb 1un6F/struc/1un6F_M389.pdb 1un6F/struc/1un6F_M421.pdb 1un6F/struc/1un6F_M54.pdb 1un6F/struc/1un6F_M275.pdb 1un6F/struc/1un6F_M151.pdb 1un6F/struc/1un6F_M176.pdb 1un6F/struc/1un6F_M113.pdb 1un6F/struc/1un6F_M418.pdb 1un6F/struc/1un6F_M270.pdb 1un6F/struc/1un6F_M86.pdb 1un6F/struc/1un6F_M88.pdb 1un6F/struc/1un6F_M180.pdb' | qsub -N mq1 -cwd -pe mpi 10