echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_0 3f1hB/struc/3f1hB_M204.pdb 3f1hB/struc/3f1hB_M425.pdb' | qsub -N mq0 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_1 3f1hB/struc/3f1hB_M404.pdb 3f1hB/struc/3f1hB_M330.pdb' | qsub -N mq1 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_2 3f1hB/struc/3f1hB_M57.pdb 3f1hB/struc/3f1hB_M337.pdb' | qsub -N mq2 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_3 3f1hB/struc/3f1hB_M217.pdb 3f1hB/struc/3f1hB_M213.pdb' | qsub -N mq3 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_4 3f1hB/struc/3f1hB_M141.pdb 3f1hB/struc/3f1hB_M380.pdb' | qsub -N mq4 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_5 3f1hB/struc/3f1hB_M143.pdb 3f1hB/struc/3f1hB_M465.pdb' | qsub -N mq5 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_6 3f1hB/struc/3f1hB_M48.pdb 3f1hB/struc/3f1hB_M78.pdb' | qsub -N mq6 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_7 3f1hB/struc/3f1hB_M500.pdb 3f1hB/struc/3f1hB_M450.pdb' | qsub -N mq7 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_8 3f1hB/struc/3f1hB_M384.pdb 3f1hB/struc/3f1hB_M16.pdb' | qsub -N mq8 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_9 3f1hB/struc/3f1hB_M403.pdb 3f1hB/struc/3f1hB_M198.pdb' | qsub -N mq9 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_10 3f1hB/struc/3f1hB_M87.pdb 3f1hB/struc/3f1hB_M287.pdb' | qsub -N mq10 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_11 3f1hB/struc/3f1hB_M463.pdb 3f1hB/struc/3f1hB_M372.pdb' | qsub -N mq11 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_12 3f1hB/struc/3f1hB_M304.pdb 3f1hB/struc/3f1hB_M441.pdb' | qsub -N mq12 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_13 3f1hB/struc/3f1hB_M260.pdb 3f1hB/struc/3f1hB_M432.pdb' | qsub -N mq13 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_14 3f1hB/struc/3f1hB_M180.pdb 3f1hB/struc/3f1hB_M378.pdb' | qsub -N mq14 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_15 3f1hB/struc/3f1hB_M274.pdb 3f1hB/struc/3f1hB_M479.pdb' | qsub -N mq15 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_16 3f1hB/struc/3f1hB_M70.pdb 3f1hB/struc/3f1hB_M438.pdb' | qsub -N mq16 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_17 3f1hB/struc/3f1hB_M245.pdb 3f1hB/struc/3f1hB_M448.pdb' | qsub -N mq17 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_18 3f1hB/struc/3f1hB_M409.pdb 3f1hB/struc/3f1hB_M12.pdb' | qsub -N mq18 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_19 3f1hB/struc/3f1hB_M151.pdb 3f1hB/struc/3f1hB_M110.pdb' | qsub -N mq19 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_20 3f1hB/struc/3f1hB_M185.pdb 3f1hB/struc/3f1hB_M257.pdb' | qsub -N mq20 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_21 3f1hB/struc/3f1hB_M435.pdb 3f1hB/struc/3f1hB_M246.pdb' | qsub -N mq21 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_22 3f1hB/struc/3f1hB_M219.pdb 3f1hB/struc/3f1hB_M81.pdb' | qsub -N mq22 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_23 3f1hB/struc/3f1hB_M208.pdb 3f1hB/struc/3f1hB_M389.pdb' | qsub -N mq23 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_24 3f1hB/struc/3f1hB_M363.pdb 3f1hB/struc/3f1hB_M440.pdb' | qsub -N mq24 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_25 3f1hB/struc/3f1hB_M117.pdb 3f1hB/struc/3f1hB_M63.pdb' | qsub -N mq25 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_26 3f1hB/struc/3f1hB_M2.pdb 3f1hB/struc/3f1hB_M360.pdb' | qsub -N mq26 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_27 3f1hB/struc/3f1hB_M431.pdb 3f1hB/struc/3f1hB_M452.pdb' | qsub -N mq27 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_28 3f1hB/struc/3f1hB_M353.pdb 3f1hB/struc/3f1hB_M224.pdb' | qsub -N mq28 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_29 3f1hB/struc/3f1hB_M340.pdb 3f1hB/struc/3f1hB_M135.pdb' | qsub -N mq29 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_30 3f1hB/struc/3f1hB_M228.pdb 3f1hB/struc/3f1hB_M174.pdb' | qsub -N mq30 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_31 3f1hB/struc/3f1hB_M152.pdb 3f1hB/struc/3f1hB_M216.pdb' | qsub -N mq31 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_32 3f1hB/struc/3f1hB_M49.pdb 3f1hB/struc/3f1hB_M284.pdb' | qsub -N mq32 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_33 3f1hB/struc/3f1hB_M273.pdb 3f1hB/struc/3f1hB_M328.pdb' | qsub -N mq33 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_34 3f1hB/struc/3f1hB_M475.pdb 3f1hB/struc/3f1hB_M104.pdb' | qsub -N mq34 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_35 3f1hB/struc/3f1hB_M53.pdb 3f1hB/struc/3f1hB_M227.pdb' | qsub -N mq35 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_36 3f1hB/struc/3f1hB_M173.pdb 3f1hB/struc/3f1hB_M329.pdb' | qsub -N mq36 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_37 3f1hB/struc/3f1hB_M58.pdb 3f1hB/struc/3f1hB_M83.pdb' | qsub -N mq37 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_38 3f1hB/struc/3f1hB_M7.pdb 3f1hB/struc/3f1hB_M418.pdb' | qsub -N mq38 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_39 3f1hB/struc/3f1hB_M331.pdb 3f1hB/struc/3f1hB_M415.pdb' | qsub -N mq39 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_40 3f1hB/struc/3f1hB_M39.pdb 3f1hB/struc/3f1hB_M60.pdb' | qsub -N mq40 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_41 3f1hB/struc/3f1hB_M412.pdb 3f1hB/struc/3f1hB_M9.pdb' | qsub -N mq41 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_42 3f1hB/struc/3f1hB_M458.pdb 3f1hB/struc/3f1hB_M294.pdb' | qsub -N mq42 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_43 3f1hB/struc/3f1hB_M453.pdb 3f1hB/struc/3f1hB_M168.pdb' | qsub -N mq43 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_44 3f1hB/struc/3f1hB_M147.pdb 3f1hB/struc/3f1hB_M237.pdb' | qsub -N mq44 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_45 3f1hB/struc/3f1hB_M207.pdb 3f1hB/struc/3f1hB_M390.pdb' | qsub -N mq45 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_46 3f1hB/struc/3f1hB_M232.pdb 3f1hB/struc/3f1hB_M200.pdb' | qsub -N mq46 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_47 3f1hB/struc/3f1hB_M126.pdb 3f1hB/struc/3f1hB_M121.pdb' | qsub -N mq47 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_48 3f1hB/struc/3f1hB_M343.pdb 3f1hB/struc/3f1hB_M408.pdb' | qsub -N mq48 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_49 3f1hB/struc/3f1hB_M93.pdb 3f1hB/struc/3f1hB_M221.pdb' | qsub -N mq49 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_50 3f1hB/struc/3f1hB_M347.pdb 3f1hB/struc/3f1hB_M206.pdb' | qsub -N mq50 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_51 3f1hB/struc/3f1hB_M280.pdb 3f1hB/struc/3f1hB_M146.pdb' | qsub -N mq51 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_52 3f1hB/struc/3f1hB_M128.pdb 3f1hB/struc/3f1hB_M267.pdb' | qsub -N mq52 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_53 3f1hB/struc/3f1hB_M188.pdb 3f1hB/struc/3f1hB_M398.pdb' | qsub -N mq53 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_54 3f1hB/struc/3f1hB_M103.pdb 3f1hB/struc/3f1hB_M97.pdb' | qsub -N mq54 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_55 3f1hB/struc/3f1hB_M332.pdb 3f1hB/struc/3f1hB_M222.pdb' | qsub -N mq55 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_56 3f1hB/struc/3f1hB_M410.pdb 3f1hB/struc/3f1hB_M249.pdb' | qsub -N mq56 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_57 3f1hB/struc/3f1hB_M113.pdb 3f1hB/struc/3f1hB_M424.pdb' | qsub -N mq57 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_58 3f1hB/struc/3f1hB_M88.pdb 3f1hB/struc/3f1hB_M127.pdb' | qsub -N mq58 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_59 3f1hB/struc/3f1hB_M120.pdb 3f1hB/struc/3f1hB_M129.pdb' | qsub -N mq59 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_60 3f1hB/struc/3f1hB_M239.pdb 3f1hB/struc/3f1hB_M29.pdb' | qsub -N mq60 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_61 3f1hB/struc/3f1hB_M32.pdb 3f1hB/struc/3f1hB_M169.pdb' | qsub -N mq61 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_62 3f1hB/struc/3f1hB_M405.pdb 3f1hB/struc/3f1hB_M381.pdb' | qsub -N mq62 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_63 3f1hB/struc/3f1hB_M47.pdb 3f1hB/struc/3f1hB_M84.pdb' | qsub -N mq63 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_64 3f1hB/struc/3f1hB_M350.pdb 3f1hB/struc/3f1hB_M262.pdb' | qsub -N mq64 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_65 3f1hB/struc/3f1hB_M357.pdb 3f1hB/struc/3f1hB_M489.pdb' | qsub -N mq65 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_66 3f1hB/struc/3f1hB_M485.pdb 3f1hB/struc/3f1hB_M191.pdb' | qsub -N mq66 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_67 3f1hB/struc/3f1hB_M429.pdb 3f1hB/struc/3f1hB_M44.pdb' | qsub -N mq67 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_68 3f1hB/struc/3f1hB_M189.pdb 3f1hB/struc/3f1hB_M85.pdb' | qsub -N mq68 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_69 3f1hB/struc/3f1hB_M125.pdb 3f1hB/struc/3f1hB_M20.pdb' | qsub -N mq69 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_70 3f1hB/struc/3f1hB_M214.pdb 3f1hB/struc/3f1hB_M5.pdb' | qsub -N mq70 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_71 3f1hB/struc/3f1hB_M278.pdb 3f1hB/struc/3f1hB_M469.pdb' | qsub -N mq71 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_72 3f1hB/struc/3f1hB_M355.pdb 3f1hB/struc/3f1hB_M478.pdb' | qsub -N mq72 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_73 3f1hB/struc/3f1hB_M321.pdb 3f1hB/struc/3f1hB_M323.pdb' | qsub -N mq73 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_74 3f1hB/struc/3f1hB_M423.pdb 3f1hB/struc/3f1hB_M183.pdb' | qsub -N mq74 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_75 3f1hB/struc/3f1hB_M165.pdb 3f1hB/struc/3f1hB_M449.pdb' | qsub -N mq75 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_76 3f1hB/struc/3f1hB_M96.pdb 3f1hB/struc/3f1hB_M244.pdb' | qsub -N mq76 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_77 3f1hB/struc/3f1hB_M307.pdb 3f1hB/struc/3f1hB_M211.pdb' | qsub -N mq77 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_78 3f1hB/struc/3f1hB_M266.pdb 3f1hB/struc/3f1hB_M496.pdb' | qsub -N mq78 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_79 3f1hB/struc/3f1hB_M338.pdb 3f1hB/struc/3f1hB_M349.pdb' | qsub -N mq79 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_80 3f1hB/struc/3f1hB_M133.pdb 3f1hB/struc/3f1hB_M498.pdb' | qsub -N mq80 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_81 3f1hB/struc/3f1hB_M252.pdb 3f1hB/struc/3f1hB_M137.pdb' | qsub -N mq81 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_82 3f1hB/struc/3f1hB_M250.pdb 3f1hB/struc/3f1hB_M140.pdb' | qsub -N mq82 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_83 3f1hB/struc/3f1hB_M215.pdb 3f1hB/struc/3f1hB_M172.pdb' | qsub -N mq83 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_84 3f1hB/struc/3f1hB_M112.pdb 3f1hB/struc/3f1hB_M290.pdb' | qsub -N mq84 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_85 3f1hB/struc/3f1hB_M40.pdb 3f1hB/struc/3f1hB_M41.pdb' | qsub -N mq85 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_86 3f1hB/struc/3f1hB_M36.pdb 3f1hB/struc/3f1hB_M43.pdb' | qsub -N mq86 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_87 3f1hB/struc/3f1hB_M354.pdb 3f1hB/struc/3f1hB_M317.pdb' | qsub -N mq87 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_88 3f1hB/struc/3f1hB_M383.pdb 3f1hB/struc/3f1hB_M263.pdb' | qsub -N mq88 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_89 3f1hB/struc/3f1hB_M437.pdb 3f1hB/struc/3f1hB_M241.pdb' | qsub -N mq89 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_90 3f1hB/struc/3f1hB_M495.pdb 3f1hB/struc/3f1hB_M138.pdb' | qsub -N mq90 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_91 3f1hB/struc/3f1hB_M171.pdb 3f1hB/struc/3f1hB_M359.pdb' | qsub -N mq91 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_92 3f1hB/struc/3f1hB_M226.pdb 3f1hB/struc/3f1hB_M130.pdb' | qsub -N mq92 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_93 3f1hB/struc/3f1hB_M300.pdb 3f1hB/struc/3f1hB_M92.pdb' | qsub -N mq93 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_94 3f1hB/struc/3f1hB_M167.pdb 3f1hB/struc/3f1hB_M361.pdb' | qsub -N mq94 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_95 3f1hB/struc/3f1hB_M46.pdb 3f1hB/struc/3f1hB_M101.pdb' | qsub -N mq95 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_96 3f1hB/struc/3f1hB_M480.pdb 3f1hB/struc/3f1hB_M474.pdb' | qsub -N mq96 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_97 3f1hB/struc/3f1hB_M160.pdb 3f1hB/struc/3f1hB_M392.pdb' | qsub -N mq97 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_98 3f1hB/struc/3f1hB_M439.pdb 3f1hB/struc/3f1hB_M35.pdb' | qsub -N mq98 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_99 3f1hB/struc/3f1hB_M72.pdb 3f1hB/struc/3f1hB_M301.pdb' | qsub -N mq99 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_100 3f1hB/struc/3f1hB_M385.pdb 3f1hB/struc/3f1hB_M24.pdb' | qsub -N mq100 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_101 3f1hB/struc/3f1hB_M417.pdb 3f1hB/struc/3f1hB_M377.pdb' | qsub -N mq101 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_102 3f1hB/struc/3f1hB_M358.pdb 3f1hB/struc/3f1hB_M111.pdb' | qsub -N mq102 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_103 3f1hB/struc/3f1hB_M352.pdb 3f1hB/struc/3f1hB_M277.pdb' | qsub -N mq103 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_104 3f1hB/struc/3f1hB_M25.pdb 3f1hB/struc/3f1hB_M282.pdb' | qsub -N mq104 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_105 3f1hB/struc/3f1hB_M132.pdb 3f1hB/struc/3f1hB_M443.pdb' | qsub -N mq105 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_106 3f1hB/struc/3f1hB_M163.pdb 3f1hB/struc/3f1hB_M145.pdb' | qsub -N mq106 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_107 3f1hB/struc/3f1hB_M270.pdb 3f1hB/struc/3f1hB_M445.pdb' | qsub -N mq107 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_108 3f1hB/struc/3f1hB_M394.pdb 3f1hB/struc/3f1hB_M155.pdb' | qsub -N mq108 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_109 3f1hB/struc/3f1hB_M460.pdb 3f1hB/struc/3f1hB_M316.pdb' | qsub -N mq109 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_110 3f1hB/struc/3f1hB_M324.pdb 3f1hB/struc/3f1hB_M238.pdb' | qsub -N mq110 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_111 3f1hB/struc/3f1hB_M364.pdb 3f1hB/struc/3f1hB_M86.pdb' | qsub -N mq111 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_112 3f1hB/struc/3f1hB_M65.pdb 3f1hB/struc/3f1hB_M447.pdb' | qsub -N mq112 -V -cwd -pe mpi 1
echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna  -o FARNA__hires_113 3f1hB/struc/3f1hB_M422.pdb 3f1hB/struc/3f1hB_M258.pdb' | qsub -N mq113 -V -cwd -pe mpi 1
