LICENSE
README.md
setup.py
data/marrow_sample_scseq_counts.csv.gz
data/sample_tsne.p
notebooks/Palantir_sample_notebook.ipynb
notebooks/comparisons/dpt.ipynb
notebooks/comparisons/fateid.ipynb
notebooks/comparisons/monocle2.ipynb
notebooks/comparisons/paga.ipynb
notebooks/comparisons/slignshot.ipynb
notebooks/comparisons/results/fateid/CLP_order.csv
notebooks/comparisons/results/fateid/DC_order.csv
notebooks/comparisons/results/fateid/Ery_order.csv
notebooks/comparisons/results/fateid/Mega_order.csv
notebooks/comparisons/results/fateid/Mono_order.csv
notebooks/comparisons/results/fateid/clusters.csv
notebooks/comparisons/results/fateid/probs.csv
notebooks/comparisons/results/fateid/tsne.csv
notebooks/comparisons/results/monocle2/phenodata.csv
notebooks/comparisons/results/monocle2/red_dims.csv
notebooks/comparisons/results/slingshot/Lineage1_CD34.csv
notebooks/comparisons/results/slingshot/Lineage1_CD79A.csv
notebooks/comparisons/results/slingshot/Lineage1_CD79B.csv
notebooks/comparisons/results/slingshot/Lineage1_CEBPD.csv
notebooks/comparisons/results/slingshot/Lineage1_CEBPG.csv
notebooks/comparisons/results/slingshot/Lineage1_CSF1R.csv
notebooks/comparisons/results/slingshot/Lineage1_GATA1.csv
notebooks/comparisons/results/slingshot/Lineage1_IRF8.csv
notebooks/comparisons/results/slingshot/Lineage1_ITGA2B.csv
notebooks/comparisons/results/slingshot/Lineage1_MPO.csv
notebooks/comparisons/results/slingshot/Lineage1_RAG1.csv
notebooks/comparisons/results/slingshot/Lineage1_SPI1.csv
notebooks/comparisons/results/slingshot/Lineage2_CD34.csv
notebooks/comparisons/results/slingshot/Lineage2_CD79A.csv
notebooks/comparisons/results/slingshot/Lineage2_CD79B.csv
notebooks/comparisons/results/slingshot/Lineage2_CEBPD.csv
notebooks/comparisons/results/slingshot/Lineage2_CEBPG.csv
notebooks/comparisons/results/slingshot/Lineage2_CSF1R.csv
notebooks/comparisons/results/slingshot/Lineage2_GATA1.csv
notebooks/comparisons/results/slingshot/Lineage2_IRF8.csv
notebooks/comparisons/results/slingshot/Lineage2_ITGA2B.csv
notebooks/comparisons/results/slingshot/Lineage2_MPO.csv
notebooks/comparisons/results/slingshot/Lineage2_RAG1.csv
notebooks/comparisons/results/slingshot/Lineage2_SPI1.csv
notebooks/comparisons/results/slingshot/Lineage3_CD34.csv
notebooks/comparisons/results/slingshot/Lineage3_CD79A.csv
notebooks/comparisons/results/slingshot/Lineage3_CD79B.csv
notebooks/comparisons/results/slingshot/Lineage3_CEBPD.csv
notebooks/comparisons/results/slingshot/Lineage3_CEBPG.csv
notebooks/comparisons/results/slingshot/Lineage3_CSF1R.csv
notebooks/comparisons/results/slingshot/Lineage3_GATA1.csv
notebooks/comparisons/results/slingshot/Lineage3_IRF8.csv
notebooks/comparisons/results/slingshot/Lineage3_ITGA2B.csv
notebooks/comparisons/results/slingshot/Lineage3_MPO.csv
notebooks/comparisons/results/slingshot/Lineage3_RAG1.csv
notebooks/comparisons/results/slingshot/Lineage3_SPI1.csv
notebooks/comparisons/results/slingshot/Lineage4_CD34.csv
notebooks/comparisons/results/slingshot/Lineage4_CD79A.csv
notebooks/comparisons/results/slingshot/Lineage4_CD79B.csv
notebooks/comparisons/results/slingshot/Lineage4_CEBPD.csv
notebooks/comparisons/results/slingshot/Lineage4_CEBPG.csv
notebooks/comparisons/results/slingshot/Lineage4_CSF1R.csv
notebooks/comparisons/results/slingshot/Lineage4_GATA1.csv
notebooks/comparisons/results/slingshot/Lineage4_IRF8.csv
notebooks/comparisons/results/slingshot/Lineage4_ITGA2B.csv
notebooks/comparisons/results/slingshot/Lineage4_MPO.csv
notebooks/comparisons/results/slingshot/Lineage4_RAG1.csv
notebooks/comparisons/results/slingshot/Lineage4_SPI1.csv
notebooks/comparisons/results/slingshot/clusters.csv
notebooks/comparisons/results/slingshot/data.csv
notebooks/comparisons/results/slingshot/exprs.csv
notebooks/comparisons/results/slingshot/weights.csv
src/palantir/__init__.py
src/palantir/core.py
src/palantir/io.py
src/palantir/plot.py
src/palantir/preprocess.py
src/palantir/presults.py
src/palantir/utils.py
src/palantir/version.py
src/palantir.egg-info/PKG-INFO
src/palantir.egg-info/SOURCES.txt
src/palantir.egg-info/dependency_links.txt
src/palantir.egg-info/requires.txt
src/palantir.egg-info/top_level.txt