.gitignore
.travis.yml
LICENSE
MANIFEST.in
README.md
RELEASING.md
deploy.sh
gnome-red-text.png
lint.sh
pylintrc
requirements.txt
setup.py
mhcgnomes/__init__.py
mhcgnomes/allele.py
mhcgnomes/allele_annotations.py
mhcgnomes/allele_without_gene.py
mhcgnomes/class2_locus.py
mhcgnomes/class2_pair.py
mhcgnomes/common.py
mhcgnomes/data.py
mhcgnomes/dataframe.py
mhcgnomes/errors.py
mhcgnomes/function_api.py
mhcgnomes/gene.py
mhcgnomes/haplotype.py
mhcgnomes/mhc_class.py
mhcgnomes/mhc_class_helpers.py
mhcgnomes/mutation.py
mhcgnomes/normalizing_dictionary.py
mhcgnomes/normalizing_set.py
mhcgnomes/notes.md
mhcgnomes/parser.py
mhcgnomes/parsing_helpers.py
mhcgnomes/result.py
mhcgnomes/result_sorting.py
mhcgnomes/result_with_gene.py
mhcgnomes/result_with_mhc_class.py
mhcgnomes/result_with_multiple_alleles.py
mhcgnomes/result_with_species.py
mhcgnomes/serotype.py
mhcgnomes/species.py
mhcgnomes/token.py
mhcgnomes/token_canonical_sequences.py
mhcgnomes/token_substitution.py
mhcgnomes/tokenize.py
mhcgnomes/version.py
mhcgnomes.egg-info/PKG-INFO
mhcgnomes.egg-info/SOURCES.txt
mhcgnomes.egg-info/dependency_links.txt
mhcgnomes.egg-info/requires.txt
mhcgnomes.egg-info/top_level.txt
mhcgnomes/data/IMGT-HLA-Allelelist-history-3.42.0.txt
mhcgnomes/data/IMGT-HLA-Deleted-alleles-3.42.0.txt
mhcgnomes/data/IMGT-HLA-Suffix-changes-3.42.0.txt
mhcgnomes/data/IPD-MHC-3.5.0.1.xml
mhcgnomes/data/allele_aliases.yaml
mhcgnomes/data/class2_locus_aliases.yaml
mhcgnomes/data/combine_allele_aliases.py
mhcgnomes/data/combine_allele_aliases.sh
mhcgnomes/data/curated_allele_aliases.yaml
mhcgnomes/data/default_alleles.yaml
mhcgnomes/data/gene_aliases.yaml
mhcgnomes/data/haplotypes.yaml
mhcgnomes/data/known_alleles.yaml
mhcgnomes/data/serotypes.yaml
mhcgnomes/data/species.yaml
test/IMGT_Allele_status.txt
test/IMGT_DLA.txt
test/IMGT_ELA.txt
test/IMGT_FISH.txt
test/IMGT_NHP.txt
test/IMGT_SLA.txt
test/MHC_prot.fasta
test/generate_iedb_functions.py
test/generate_imgt_hla_function.py
test/generate_ipd_mhc_functions.py
test/generate_netmhciipan_3_1_functions.py
test/generate_netmhcpan_functions.py
test/hla_prot.fasta
test/iedb_allele_counts.csv
test/netmhciipan_3_1_alleles.txt
test/netmhcpan_3_0_alleles.txt
test/netmhcpan_4_0_alleles.txt
test/test_Bofr.py
test/test_allele.py
test/test_allele_aliases.py
test/test_annotations.py
test/test_bad_inputs.py
test/test_cat.py
test/test_chicken.py
test/test_class2_locus.py
test/test_class2_pair.py
test/test_cow.py
test/test_dog.py
test/test_fish.py
test/test_haplotype.py
test/test_horse.py
test/test_human.py
test/test_iedb_names.py
test/test_imgt_hla_names.py
test/test_ipd_mhc_names.py
test/test_mhc_class_parsing.py
test/test_mouse.py
test/test_netmhciipan_3_1_alleles.py
test/test_netmhcpan_3_0_alleles.py
test/test_netmhcpan_4_0_alleles.py
test/test_nhp.py
test/test_normalizing_dictionary.py
test/test_normalizing_set.py
test/test_parser.py
test/test_rat.py
test/test_serotype.py
test/test_sheep.py
test/test_species.py
test/test_swine.py
test/test_tokenize.py
test/test_uniprot_descriptions.py