.gitignore
.pre-commit-config.yaml
DEVELOPER.md
LICENSE
README.md
justfile
pyproject.toml
.github/dependabot.yml
.github/workflows/deploy.yml
.github/workflows/docs.yml
.github/workflows/make_bundle_app.yml
.github/workflows/test.yml
docs/Makefile
docs/source/conf.py
docs/source/editing.rst
docs/source/getting_started.rst
docs/source/index.rst
docs/source/key_bindings.rst
docs/source/motile.rst
docs/source/tree_view.rst
docs/source/images/add_edge.png
docs/source/images/add_node.png
docs/source/images/break_edge.png
docs/source/images/delete_node.png
docs/source/images/results_demo_720p.mp4
scripts/hela_example_tracks.csv
scripts/load_external_points.py
scripts/run_hela.py
scripts/view_external_tracks.py
src/motile_tracker/__init__.py
src/motile_tracker/__main__.py
src/motile_tracker/_version.py
src/motile_tracker/example_data.py
src/motile_tracker/launcher.py
src/motile_tracker/napari.yaml
src/motile_tracker.egg-info/PKG-INFO
src/motile_tracker.egg-info/SOURCES.txt
src/motile_tracker.egg-info/dependency_links.txt
src/motile_tracker.egg-info/entry_points.txt
src/motile_tracker.egg-info/requires.txt
src/motile_tracker.egg-info/top_level.txt
src/motile_tracker/application_menus/__init__.py
src/motile_tracker/application_menus/editing_menu.py
src/motile_tracker/application_menus/main_app.py
src/motile_tracker/application_menus/menu_widget.py
src/motile_tracker/data_views/__init__.py
src/motile_tracker/data_views/graph_attributes.py
src/motile_tracker/data_views/_tests/conftest.py
src/motile_tracker/data_views/_tests/test_link_clipping_planes.py
src/motile_tracker/data_views/_tests/test_ortho_views.py
src/motile_tracker/data_views/_tests/test_track_labels.py
src/motile_tracker/data_views/_tests/test_tree_widget_utils.py
src/motile_tracker/data_views/views/__init__.py
src/motile_tracker/data_views/views/ortho_views.py
src/motile_tracker/data_views/views/layers/__init__.py
src/motile_tracker/data_views/views/layers/click_utils.py
src/motile_tracker/data_views/views/layers/track_graph.py
src/motile_tracker/data_views/views/layers/track_labels.py
src/motile_tracker/data_views/views/layers/track_points.py
src/motile_tracker/data_views/views/layers/tracks_layer_group.py
src/motile_tracker/data_views/views/tree_view/__init__.py
src/motile_tracker/data_views/views/tree_view/flip_axes_widget.py
src/motile_tracker/data_views/views/tree_view/navigation_widget.py
src/motile_tracker/data_views/views/tree_view/tree_view_feature_widget.py
src/motile_tracker/data_views/views/tree_view/tree_view_mode_widget.py
src/motile_tracker/data_views/views/tree_view/tree_widget.py
src/motile_tracker/data_views/views/tree_view/tree_widget_utils.py
src/motile_tracker/data_views/views_coordinator/__init__.py
src/motile_tracker/data_views/views_coordinator/key_binds.py
src/motile_tracker/data_views/views_coordinator/node_selection_list.py
src/motile_tracker/data_views/views_coordinator/tracks_list.py
src/motile_tracker/data_views/views_coordinator/tracks_viewer.py
src/motile_tracker/import_export/__init__.py
src/motile_tracker/import_export/load_tracks.py
src/motile_tracker/import_export/_tests/hela_example_tracks.csv
src/motile_tracker/import_export/_tests/test_export_solution_to_csv.py
src/motile_tracker/import_export/_tests/test_import_external_tracks.py
src/motile_tracker/import_export/menus/__init__.py
src/motile_tracker/import_export/menus/csv_widget.py
src/motile_tracker/import_export/menus/import_external_tracks_dialog.py
src/motile_tracker/import_export/menus/measurement_widget.py
src/motile_tracker/import_export/menus/metadata_menu.py
src/motile_tracker/import_export/menus/segmentation_widget.py
src/motile_tracker/import_export/menus/import_from_geff/__init__.py
src/motile_tracker/import_export/menus/import_from_geff/geff_import_dialog.py
src/motile_tracker/import_export/menus/import_from_geff/geff_import_utils.py
src/motile_tracker/import_export/menus/import_from_geff/geff_import_widget.py
src/motile_tracker/import_export/menus/import_from_geff/geff_prop_map_widget.py
src/motile_tracker/import_export/menus/import_from_geff/geff_scale_widget.py
src/motile_tracker/import_export/menus/import_from_geff/geff_segmentation_widgets.py
src/motile_tracker/motile/backend/__init__.py
src/motile_tracker/motile/backend/motile_run.py
src/motile_tracker/motile/backend/solve.py
src/motile_tracker/motile/backend/solver_params.py
src/motile_tracker/motile/menus/__init__.py
src/motile_tracker/motile/menus/motile_widget.py
src/motile_tracker/motile/menus/param_values.py
src/motile_tracker/motile/menus/params_editor.py
src/motile_tracker/motile/menus/params_viewer.py
src/motile_tracker/motile/menus/run_editor.py
src/motile_tracker/motile/menus/run_viewer.py
tests/conftest.py
tests/motile/backend/test_motile_run.py
tests/motile/backend/test_solver.py
tests/motile/menus/test_run_editor.py