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Manipulating biological data
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.. authors, Gavin Huttley, Kristian Rother, Patrick Yannul

Sequences
=========

.. toctree::
    :maxdepth: 1
    
    loading_sequences
    moltypesequence
    alphabet
    DNA_and_RNA_sequences
    protein_sequences
    alignments
    annotations

Genetic code
============

.. toctree::
    :maxdepth: 1

    genetic_code

Trees
=====

.. toctree::
    :maxdepth: 1

    simple_trees
    phylonodes
    managing_trees

Tables
======

.. toctree::
    :maxdepth: 1

    tables

Structures
==========

.. toctree::
    :maxdepth: 1
    
    structural_data
    structural_data_2
    structural_contacts
