LICENSE
MANIFEST.in
README.md
setup.py
pytheus/__init__.py
pytheus/analyzer.py
pytheus/cli.py
pytheus/fancy_classes.py
pytheus/graphplot.py
pytheus/help_functions.py
pytheus/leiwand.py
pytheus/lossfunctions.py
pytheus/main.py
pytheus/optimizer.py
pytheus/saver.py
pytheus/theseus.py
pytheus/custom_loss/__init__.py
pytheus/custom_loss/assembly_index.py
pytheus/graphs/AssemblyIndex/.DS_Store
pytheus/graphs/AssemblyIndex/assembly4/config_assembly4.json
pytheus/graphs/AssemblyIndex/assembly4/plot_assembly4.json
pytheus/graphs/AssemblyIndex/assembly6/config_assembly6.json
pytheus/graphs/AssemblyIndex/assembly6/plot_assembly6.json
pytheus/graphs/Communication/2pES_3d/config_2pES_3d.json
pytheus/graphs/Communication/2pES_3d/graph_2pES_3d.aux
pytheus/graphs/Communication/2pES_3d/graph_2pES_3d.pdf
pytheus/graphs/Communication/2pES_3d/graph_2pES_3d.tex
pytheus/graphs/Communication/2pES_3d/original_2pES_3d_clean-16-9-0-0.1000_0.0000.json
pytheus/graphs/Communication/2pES_3d/plot_2pES_3d_clean-16-9-0.1000_0.0000.json
pytheus/graphs/Communication/3pES/config_3pES.json
pytheus/graphs/Communication/3pES/graph_3pES.aux
pytheus/graphs/Communication/3pES/graph_3pES.pdf
pytheus/graphs/Communication/3pES/graph_3pES.tex
pytheus/graphs/Communication/3pES/plot_3pES_clean-18-16-0.1111_0.0000.json
pytheus/graphs/Communication/ES3d_sp/config_ES3d_sp.json
pytheus/graphs/Communication/ES3d_sp/graph_ES3d_sp.aux
pytheus/graphs/Communication/ES3d_sp/graph_ES3d_sp.pdf
pytheus/graphs/Communication/ES3d_sp/graph_ES3d_sp.tex
pytheus/graphs/Communication/ES3d_sp/plot_ES3d_sp_clean-18-14-0.0769_0.0000.json
pytheus/graphs/Communication/ES_246/config_ES_246.json
pytheus/graphs/Communication/ES_246/graph_ES_246.aux
pytheus/graphs/Communication/ES_246/graph_ES_246.pdf
pytheus/graphs/Communication/ES_246/graph_ES_246.tex
pytheus/graphs/Communication/ES_246/original_clean-12-6-0.2000_0.0000.json
pytheus/graphs/Communication/ES_246/plot_clean-12-6-0.2000_0.0000.json
pytheus/graphs/CondensedMatter/.DS_Store
pytheus/graphs/CondensedMatter/aklt3spin1/config_aklt3spin1.json
pytheus/graphs/CondensedMatter/aklt3spin1/graph_aklt3spin1.aux
pytheus/graphs/CondensedMatter/aklt3spin1/graph_aklt3spin1.pdf
pytheus/graphs/CondensedMatter/aklt3spin1/graph_aklt3spin1.tex
pytheus/graphs/CondensedMatter/aklt3spin1/plot_aklt3spin1_clean-9-6-0.1429_0.0000.json
pytheus/graphs/CondensedMatter/aklt3spin2/config_aklt3spin2.json
pytheus/graphs/CondensedMatter/aklt3spin2/graph_aklt3spin2.aux
pytheus/graphs/CondensedMatter/aklt3spin2/graph_aklt3spin2.pdf
pytheus/graphs/CondensedMatter/aklt3spin2/graph_aklt3spin2.tex
pytheus/graphs/CondensedMatter/aklt3spin2/plot_aklt3spin2_rough-40-294-0.0960_0.0471.json
pytheus/graphs/CondensedMatter/aklt4spin1/config_aklt4spin1.json
pytheus/graphs/CondensedMatter/aklt4spin1/graph_aklt4spin1.aux
pytheus/graphs/CondensedMatter/aklt4spin1/graph_aklt4spin1.pdf
pytheus/graphs/CondensedMatter/aklt4spin1/graph_aklt4spin1.tex
pytheus/graphs/CondensedMatter/aklt4spin1/plot_aklt4spin1.json
pytheus/graphs/CondensedMatter/aklt4spin1/other_solutions/clean-18-27-0.0455_0.0000(0).json
pytheus/graphs/CondensedMatter/aklt4spin1/other_solutions/clean-18-27-0.0455_0.0000(1).json
pytheus/graphs/CondensedMatter/aklt4spin1/other_solutions/clean-18-27-0.0455_0.0000(2).json
pytheus/graphs/CondensedMatter/aklt4spin1/other_solutions/clean-18-27-0.0455_0.0000(3).json
pytheus/graphs/CondensedMatter/aklt4spin1/other_solutions/clean-18-27-0.0455_0.0000(4).json
pytheus/graphs/CondensedMatter/aklt4spin1/other_solutions/clean-18-27-0.0455_0.0000(5).json
pytheus/graphs/CondensedMatter/aklt4spin1/other_solutions/clean-18-27-0.0455_0.0000(6).json
pytheus/graphs/CondensedMatter/aklt4spin1/other_solutions/clean-18-27-0.0455_0.0000(7).json
pytheus/graphs/CondensedMatter/aklt4spin1/other_solutions/clean-18-27-0.0455_0.0000(8).json
pytheus/graphs/CondensedMatter/aklt4spin1/other_solutions/clean-18-27-0.0455_0.0000.json
pytheus/graphs/CondensedMatter/dyck6/config_dyck6.json
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pytheus/graphs/CondensedMatter/dyck6/graph_dyck6.pdf
pytheus/graphs/CondensedMatter/dyck6/graph_dyck6.tex
pytheus/graphs/CondensedMatter/dyck6/plot_dyck6_clean-8-5-0.1667_0.0000.json
pytheus/graphs/CondensedMatter/dyck8/config_dyck8.json
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pytheus/graphs/CondensedMatter/dyck8/graph_dyck8.pdf
pytheus/graphs/CondensedMatter/dyck8/graph_dyck8.tex
pytheus/graphs/CondensedMatter/dyck8/plot_dyck8_clean-14-14-0.0667_0.0000.json
pytheus/graphs/CondensedMatter/haldaneA_3/config_haldaneA_3.json
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pytheus/graphs/CondensedMatter/haldaneA_3/graph_haldaneA_3.tex
pytheus/graphs/CondensedMatter/haldaneA_3/original_haldaneA_27edges.json
pytheus/graphs/CondensedMatter/haldaneA_3/plot_haldaneA_27edges.json
pytheus/graphs/CondensedMatter/haldaneB_3/config_haldaneB_3.json
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pytheus/graphs/CondensedMatter/haldaneB_3/plot_haldaneB_3_clean-15-10-0.0435_0.0000.json
pytheus/graphs/CondensedMatter/haldaneC_3/config_haldaneC_3.json
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pytheus/graphs/CondensedMatter/haldaneC_3/plot_haldaneC_3_clean-15-10-0.0435_0.0000.json
pytheus/graphs/CondensedMatter/majumdar4/config_majumdar4.json
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pytheus/graphs/CondensedMatter/majumdar4/graph_majumdar4.pdf
pytheus/graphs/CondensedMatter/majumdar4/graph_majumdar4.tex
pytheus/graphs/CondensedMatter/majumdar4/plot_majumdar4_clean-9-8-0.0769_0.0000.json
pytheus/graphs/CondensedMatter/majumdar6/config_majumdar6.json
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pytheus/graphs/CondensedMatter/majumdar6/graph_majumdar6.pdf
pytheus/graphs/CondensedMatter/majumdar6/graph_majumdar6.tex
pytheus/graphs/CondensedMatter/majumdar6/plot_majumdar6_clean-27-112-0.0204_0.0000.json
pytheus/graphs/CondensedMatter/motzkin3/config_motzkin3.json
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pytheus/graphs/CondensedMatter/motzkin3/graph_motzkin3.tex
pytheus/graphs/CondensedMatter/motzkin3/plot_motzkin3_clean-7-4-0.2000_0.0000.json
pytheus/graphs/CondensedMatter/motzkin4/config_motzkin4.json
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pytheus/graphs/CondensedMatter/motzkin4/graph_motzkin4.tex
pytheus/graphs/CondensedMatter/motzkin4/plot_motzkin4_clean-12-12-0.1111_0.0000.json
pytheus/graphs/CondensedMatter/nbody3/config_nbody3.json
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pytheus/graphs/CondensedMatter/nbody4/config_nbody4.json
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pytheus/graphs/CondensedMatter/nbody5/config_nbody5.json
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pytheus/graphs/CondensedMatter/nbody6/config_nbody6.json
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pytheus/graphs/CondensedMatter/nbody6/plot_nbody6.json
pytheus/graphs/CondensedMatter/oneDspinhalfwire/config_oneDspinhalfwire.json
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pytheus/graphs/CondensedMatter/oneDspinhalfwire/plot_oneDspinhalfwire_clean-6-8-0.1137_0.0029.json
pytheus/graphs/CondensedMatter/oneDspinhalfwire4/config_oneDspinhalfwire4.json
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pytheus/graphs/CondensedMatter/oneDspinhalfwire4/plot_oneDspinhalfwire4_15edges.json
pytheus/graphs/CondensedMatter/onsager6/config_onsager6.json
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pytheus/graphs/CondensedMatter/onsager8/config_onsager8.json
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pytheus/graphs/CondensedMatter/onsager8/plot_onsager8.json
pytheus/graphs/CondensedMatter/pxp6/config_PXPscar_6.json
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pytheus/graphs/CondensedMatter/pxp6/graph_pxp6.tex
pytheus/graphs/CondensedMatter/pxp6/plot_pxp6_rough-22-45-0.0000_0.0379.json
pytheus/graphs/CondensedMatter/pxp6/other_solutions/rough-22-45-0.0000_0.0379.json
pytheus/graphs/CondensedMatter/pxp8/config_PXP8.json
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pytheus/graphs/CondensedMatter/pxp8/plot_pxp8_rough-22-60-0.0000_0.0348.json
pytheus/graphs/CondensedMatter/pxp8/other_solutions/rough-22-60-0.0000_0.0348.json
pytheus/graphs/CondensedMatter/spin1/config_spin1.json
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pytheus/graphs/CondensedMatter/spin32letter/config_spin32letter.json
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pytheus/graphs/CondensedMatter/spin32letter/plot_spin32letter_clean-22-56-0.0244_0.0000.json
pytheus/graphs/CondensedMatter/spin3halfsMINUS/config_spin3halfsMINUS.json
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pytheus/graphs/CondensedMatter/spin3halfsMINUS/other_solutions/spin3minus_3_clean-13-12-0.1429_0.0000.json
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pytheus/graphs/CondensedMatter/spin3halfsPLUS/other_solutions/clean-14-12-0.1429_0.0000.json
pytheus/graphs/CondensedMatter/wAF1_3/config_wAF1_3_wAF1_3_rough.json
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pytheus/graphs/CondensedMatter/wAF2_3/config_wAF2_3_wAF2_3_rough.json
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