Metadata-Version: 1.1
Name: spyking-circus
Version: 0.5b1
Summary: Fast spike sorting by template matching
Home-page: http://spyking-circus.rtfd.org
Author: Pierre Yger and Olivier Marre
Author-email: pierre.yger@inserm.fr
License: License :: OSI Approved :: UPMC CNRS INSERM Logiciel Libre License, version 2.1 (CeCILL-2.1)
Description: SpyKING CIRCUS
        ==============
        
        .. image:: http://spyking-circus.readthedocs.io/en/latest/_images/circus.png
           :alt: SpyKING CIRCUS logo
        
        
        *A fast and scalable solution for spike sorting of large-scale extracellular recordings*
        
        SpyKING CIRCUS is a python code to allow fast spike sorting on multi channel recordings. 
        A preprint with the details of the algorithm can be found on BioRxiv at http://biorxiv.org/content/early/2016/08/04/067843. 
        It has been tested on datasets coming from *in vitro* retina 
        with 252 electrodes MEA, from *in vivo* hippocampus with tetrodes, *in vivo* and *in vitro* cortex 
        data with 30 and up to 4225 channels, with good results. Synthetic tests on these data show 
        that cells firing at more than 0.5Hz can be detected, and their spikes recovered with error 
        rates at around 1%, even resolving overlapping spikes and synchronous firing. It seems to 
        be compatible with optogenetic stimulation, based on experimental data obtained in the retina.
        
        SpyKING CIRCUS is currently still under development. Please do not hesitate to report issues with the issue tracker
        
        * Documentation can be found at http://spyking-circus.rtfd.org
        * A Google group can be found at http://groups.google.com/forum/#!forum/spyking-circus-users
        * A bug tracker can be found at https://github.com/spyking-circus/spyking-circus/issues
        
        :copyright: Copyright 2006-2016 by the SpyKING CIRCUS team, see AUTHORS.
        :license: CeCILL, see LICENSE for details.
        
        .. image::  https://anaconda.org/spyking-circus/spyking-circus/badges/version.svg
            :target: https://anaconda.org/spyking-circus/spyking-circus
        
        .. image::  https://badge.fury.io/py/spyking-circus.svg
            :target: https://badge.fury.io/py/spyking-circus
        
        .. image:: https://img.shields.io/badge/docs-latest-brightgreen.svg?style=flat
            :target: http://spyking-circus.readthedocs.io/en/latest/?badge=latest
        
        .. image:: https://ci.appveyor.com/api/projects/status/crb1gm862985hieq?svg=true
            :target: https://ci.appveyor.com/project/spyking-circus/spyking-circus
        
        .. image:: https://travis-ci.org/spyking-circus/spyking-circus.svg?branch=master
            :target: https://travis-ci.org/spyking-circus/spyking-circus
        
Keywords: spike sorting template matching tetrodes extracellular
Platform: UNKNOWN
Classifier: Development Status :: 4 - Beta
Classifier: Environment :: Console
Classifier: Intended Audience :: Science/Research
Classifier: License :: Other/Proprietary License
Classifier: Natural Language :: English
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 2
Classifier: Programming Language :: Python :: 3
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
