matplotlib
numpy>=2.1
pandas>=2.2.2
scikit-learn>=1.4
scipy
seaborn
torch
tqdm
toytree
optuna
rich
rich[jupyter]
snpio

[dev]
twine
wheel
pytest
sphinx
sphinx-rtd-theme
sphinx-autodoc-typehints
sphinxcontrib-napoleon
sphinxcontrib-programoutput
requests

[docs]
sphinx
sphinx-rtd-theme
sphinx_autodoc_typehints
sphinxcontrib-napoleon
sphinxcontrib-programoutput

[gui]
fastapi>=0.110
uvicorn[standard]>=0.23

[intel]
scikit-learn-intelex

[optional]
PyObjC
