Rica is an interactive web-based tool for exploring ICA components
with 3D brain visualization and
can be used to manually change component classifications.
To view these results in Rica locally, run this command in your output directory:
python open_rica_report.py
This will download Rica (if needed), start a local server, and open your browser.
ICA components
{{ content }}
{{ tsne }}
Carpet plots
{{ buttons }}
{% if adaptiveMaskExists %}
Adaptive mask
{% endif %}
{% if t2starExists %}
T2*
{% endif %} {% if varianceExists %}
T2* Estimate Variance
{% endif %} {% if s0Exists %}
S0
{% endif %} {% if varianceExists %}
S0 Estimate Variance
T2* and S0 Estimate Covariance
{% endif %} {% if rmseExists %}
T2* and S0 model fit (RMSE). (Scaled between 2nd and 98th percentiles)