run the command:
ManiCell -GA

You should get an output similar to ManipCell.log, as well as:
- two fgraph.dat and fgraphJ.dat files.
The second one is made for the Jmol language of commands
The first one is very useful to calculate the scalar product of each eigenvector of the laplacian and any list of atomic property, for example atomic charges, in order to extract these properties for a specific molecule

- as usual with ManipCell, two CONTCAR_MC and CONTCAR_MC.cif files. They shouldnot differ from the original CONTACR file, unless for atoms that lay slightly outside the unitcell, that have been shifted inside the cell by ManipCell
