pydantic~=2.1
bioutils
requests
canonicaljson
typing-extensions

[dev]
pytest
pytest-cov
pytest-vcr
vcrpy>=7.0.0
pyyaml
pre-commit>=4.0.1
ruff==0.9.4
sphinx
sphinx_rtd_theme

[extras]
psycopg2-binary
biocommons.seqrepo>=0.5.1
bioutils>=0.5.2
hgvs<2.0,>=1.5.5
dill~=0.3.7
click
pysam==0.23.0

[notebooks]
jupyter
pyyaml
