CHANGELOG.md
CITATION.cff
CONTRIBUTING.md
COPYING
MANIFEST.in
README.md
pyproject.toml
setup.cfg
setup.py
pyrodigal/__init__.py
pyrodigal/__main__.py
pyrodigal/_connection.h
pyrodigal/_connection.pxd
pyrodigal/_pyrodigal.pxd
pyrodigal/_pyrodigal.pyi
pyrodigal/_pyrodigal.pyx
pyrodigal/_sequence.h
pyrodigal/_sequence.pxd
pyrodigal/_unicode.pxd
pyrodigal/_version.py
pyrodigal/cli.py
pyrodigal/py.typed
pyrodigal.egg-info/PKG-INFO
pyrodigal.egg-info/SOURCES.txt
pyrodigal.egg-info/dependency_links.txt
pyrodigal.egg-info/entry_points.txt
pyrodigal.egg-info/not-zip-safe
pyrodigal.egg-info/top_level.txt
pyrodigal/cpu_features/__init__.pxd
pyrodigal/cpu_features/aarch64.pxd
pyrodigal/cpu_features/arm.pxd
pyrodigal/cpu_features/x86.pxd
pyrodigal/impl/__init__.pxd
pyrodigal/impl/avx.c
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pyrodigal/impl/generic.c
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pyrodigal/impl/mmx.c
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pyrodigal/impl/sse.c
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pyrodigal/impl/template.h
pyrodigal/prodigal/__init__.pxd
pyrodigal/prodigal/bitmap.pxd
pyrodigal/prodigal/dprog.pxd
pyrodigal/prodigal/gene.pxd
pyrodigal/prodigal/metagenomic.pxd
pyrodigal/prodigal/node.pxd
pyrodigal/prodigal/sequence.pxd
pyrodigal/prodigal/training.pxd
pyrodigal/tests/__init__.py
pyrodigal/tests/fasta.py
pyrodigal/tests/requirements.txt
pyrodigal/tests/test_connection_scorer.py
pyrodigal/tests/test_doctest.py
pyrodigal/tests/test_gene.py
pyrodigal/tests/test_genes.py
pyrodigal/tests/test_mask.py
pyrodigal/tests/test_nodes.py
pyrodigal/tests/test_orf_finder.py
pyrodigal/tests/test_sequence.py
pyrodigal/tests/test_training_info.py
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vendor/Prodigal/CHANGES
vendor/Prodigal/LICENSE
vendor/Prodigal/Makefile
vendor/Prodigal/README.md
vendor/Prodigal/VERSION
vendor/Prodigal/bitmap.c
vendor/Prodigal/bitmap.h
vendor/Prodigal/dprog.c
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vendor/Prodigal/fptr.h
vendor/Prodigal/gene.c
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vendor/Prodigal/metagenomic.c
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vendor/Prodigal/node.c
vendor/Prodigal/node.h
vendor/Prodigal/sequence.c
vendor/Prodigal/sequence.h
vendor/Prodigal/training.c
vendor/Prodigal/training.h
vendor/cpu_features/CONTRIBUTING.md
vendor/cpu_features/LICENSE
vendor/cpu_features/README.md
vendor/cpu_features/ci/README.md
vendor/cpu_features/cmake/README.md
vendor/cpu_features/include/cpu_features_cache_info.h
vendor/cpu_features/include/cpu_features_macros.h
vendor/cpu_features/include/cpuinfo_aarch64.h
vendor/cpu_features/include/cpuinfo_arm.h
vendor/cpu_features/include/cpuinfo_mips.h
vendor/cpu_features/include/cpuinfo_ppc.h
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vendor/cpu_features/include/internal/cpuid_x86.h
vendor/cpu_features/include/internal/filesystem.h
vendor/cpu_features/include/internal/hwcaps.h
vendor/cpu_features/include/internal/stack_line_reader.h
vendor/cpu_features/include/internal/string_view.h
vendor/cpu_features/ndk_compat/README.md
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vendor/cpu_features/ndk_compat/ndk-compat-test.c
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vendor/cpu_features/src/impl_arm_linux_or_android.c
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vendor/cpu_features/test/filesystem_for_testing.h
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