.gitignore
LICENSE
MTDB.md
README.md
TODO.md
USAGE.md
pyproject.toml
conda/build.sh
conda/meta.yaml
conda/archive/meta.yaml
misc/ablogo.png
misc/ablogo.white.png
misc/crap_example.png
misc/examples.png
misc/logo.png
misc/logo.white.png
misc/mtdb.png
misc/pictogo.png
misc/pictogo.white.png
mycotools/__init__.py
mycotools/acc2fa.py
mycotools/acc2gbk.py
mycotools/acc2gff.py
mycotools/acc2locus.py
mycotools/add2gff.py
mycotools/annotationStats.py
mycotools/assemblyStats.py
mycotools/bioreform.py
mycotools/coords2fa.py
mycotools/crap.py
mycotools/db2files.py
mycotools/db2hgs.py
mycotools/db2microsyntree.py
mycotools/db2search.py
mycotools/extract_mtdb.py
mycotools/fa2clus.py
mycotools/fa2hmmer2fa.py
mycotools/fa2mass.py
mycotools/fa2tree.py
mycotools/fna2faa.py
mycotools/gff2seq.py
mycotools/gff2svg.py
mycotools/jgiDwnld.py
mycotools/manage_mtdb.py
mycotools/mtdb.py
mycotools/ncbiAcc2fa.py
mycotools/ncbiDwnld.py
mycotools/ome2name.py
mycotools/predb2mtdb.py
mycotools/treetools.py
mycotools/update_mtdb.py
mycotools.egg-info/PKG-INFO
mycotools.egg-info/SOURCES.txt
mycotools.egg-info/dependency_links.txt
mycotools.egg-info/entry_points.txt
mycotools.egg-info/requires.txt
mycotools.egg-info/top_level.txt
mycotools/lib/README.md
mycotools/lib/TODO.md
mycotools/lib/__init__.py
mycotools/lib/biotools.py
mycotools/lib/dbtools.py
mycotools/lib/kontools.py
mycotools/utils/__init__.py
mycotools/utils/curGFF3.py
mycotools/utils/extractHmmAcc.py
mycotools/utils/extractHmmsearch.py
mycotools/utils/gff2gff3.py
mycotools/utils/gtf2gff3.py
mycotools/utils/jgi2db.py
mycotools/utils/ncbi2db.py
mycotools/utils/og2mycodb.py
test/README.md
test/mycotools_workshop.md
test/reference.mtdb
test/scos.hmm
test/ust.mtdb